A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15909277



Internal ID19981217
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:52301000..52306661hg38UCSC Ensembl
chr6:52165798..52171459hg19UCSC Ensembl
Cytoband6p12.2
Allele length
AssemblyAllele length
hg385662
hg195662
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4134020
Supporting Variants
Samples
Known Genes
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15909277
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.004326


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