A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15908183



Internal ID19980123
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:2145335..2151848hg38UCSC Ensembl
chr6:2145569..2152082hg19UCSC Ensembl
Cytoband6p25.3
Allele length
AssemblyAllele length
hg386514
hg196514
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4129948
Supporting Variants
Samples
Known GenesGMDS
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15908183
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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