A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15903735



Internal ID19975675
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:95531610..95535624hg38UCSC Ensembl
chr5:94867314..94871328hg19UCSC Ensembl
Cytoband5q15
Allele length
AssemblyAllele length
hg384015
hg194015
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4131629
Supporting Variants
Samples
Known GenesTTC37
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15903735
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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