A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15902955



Internal ID19628209
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:69175270..69175322hg38UCSC Ensembl
chr5:68471097..68471149hg19UCSC Ensembl
Cytoband5q13.2
Allele length
AssemblyAllele length
hg3853
hg1953
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4523409
Supporting Variants
Samples
Known GenesCCNB1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15902955
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.020731


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