A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15899051



Internal ID19624305
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:53102309..53102634hg38UCSC Ensembl
chr5:52398139..52398464hg19UCSC Ensembl
Cytoband5q11.2
Allele length
AssemblyAllele length
hg38326
hg19326
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4116813
Supporting Variants
Samples
Known GenesMOCS2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15899051
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.142416


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