A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15897



Internal ID15494881
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:29949653..29969805hg38UCSC Ensembl
Outerchr6:29946931..29970998hg38UCSC Ensembl
Innerchr6:29917430..29937582hg19UCSC Ensembl
Outerchr6:29914708..29938775hg19UCSC Ensembl
Innerchr6:30025409..30045561hg18UCSC Ensembl
Outerchr6:30022687..30046754hg18UCSC Ensembl
Innerchr6:30025409..30045561hg17UCSC Ensembl
Outerchr6:30022687..30046754hg17UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg3824068
hg1924068
hg1824068
hg1724068
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10810
Supporting Variants
SamplesNA19132
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15897
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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