A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15874827



Internal ID19946767
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:161607740..161619490hg38UCSC Ensembl
chr2:162464250..162476000hg19UCSC Ensembl
Cytoband2q24.2
Allele length
AssemblyAllele length
hg3811751
hg1911751
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4078749
Supporting Variants
Samples
Known Genes
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15874827
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.00019


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer