A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15870



Internal ID15843658
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:95984342..95984998hg38UCSC Ensembl
Outerchr5:95983736..95985726hg38UCSC Ensembl
Innerchr5:95320046..95320702hg19UCSC Ensembl
Outerchr5:95319440..95321430hg19UCSC Ensembl
Innerchr5:95345802..95346458hg18UCSC Ensembl
Outerchr5:95345196..95347186hg18UCSC Ensembl
Innerchr5:95345802..95346458hg17UCSC Ensembl
Outerchr5:95345196..95347186hg17UCSC Ensembl
Cytoband5q15
Allele length
AssemblyAllele length
hg381991
hg191991
hg181991
hg171991
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10718
Supporting Variants
SamplesNA19221
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15870
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer