A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15863335



Internal ID19588589
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr21:36083029..36137209hg38UCSC Ensembl
chr21:37455327..37509507hg19UCSC Ensembl
Cytoband21q22.12
Allele length
AssemblyAllele length
hg3854181
hg1954181
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4276271
Supporting Variants
Samples
Known GenesCBR3, CBR3-AS1, LOC100133286
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15863335
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.00014


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