A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15862472



Internal ID19934412
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr22:33698584..33708625hg38UCSC Ensembl
chr22:34094570..34104611hg19UCSC Ensembl
Cytoband22q12.3
Allele length
AssemblyAllele length
hg3810042
hg1910042
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4278083
Supporting Variants
Samples
Known GenesLARGE
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15862472
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000184


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer