A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15859206



Internal ID19584460
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr20:14022069..14024600hg38UCSC Ensembl
chr20:14002715..14005246hg19UCSC Ensembl
Cytoband20p12.1
Allele length
AssemblyAllele length
hg382532
hg192532
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4281906
Supporting Variants
Samples
Known GenesMACROD2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15859206
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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