A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15856295



Internal ID19581550
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:10035988..10043603hg38UCSC Ensembl
chr1:10096046..10103661hg19UCSC Ensembl
Cytoband1p36.22
Allele length
AssemblyAllele length
hg387616
hg197616
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4043614
Supporting Variants
Samples
Known GenesUBE4B
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15856295
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000099


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