A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15852



Internal ID15832608
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:35777062..35798202hg38UCSC Ensembl
Outerchr6:35776413..35799140hg38UCSC Ensembl
Innerchr6:35744839..35765979hg19UCSC Ensembl
Outerchr6:35744190..35766917hg19UCSC Ensembl
Innerchr6:35852817..35873957hg18UCSC Ensembl
Outerchr6:35852168..35874895hg18UCSC Ensembl
Innerchr6:35852817..35873957hg17UCSC Ensembl
Outerchr6:35852168..35874895hg17UCSC Ensembl
Cytoband6p21.31
Allele length
AssemblyAllele length
hg3822728
hg1922728
hg1822728
hg1722728
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7891
Supporting Variants
SamplesNA18502
Known GenesCLPS, CLPSL1, CLPSL2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15852
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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