A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15844140



Internal ID19569540
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:45660924..45674073hg38UCSC Ensembl
chr19:46164182..46177331hg19UCSC Ensembl
Cytoband19q13.32
Allele length
AssemblyAllele length
hg3813150
hg1913150
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4260638
Supporting Variants
Samples
Known GenesGIPR
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15844140
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000092


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