A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15833407



Internal ID19905493
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:87737346..87744144hg38UCSC Ensembl
chr16:87770952..87777750hg19UCSC Ensembl
Cytoband16q24.2
Allele length
AssemblyAllele length
hg386799
hg196799
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4240771
Supporting Variants
Samples
Known GenesKLHDC4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15833407
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000051


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