A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15833156



Internal ID19905242
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:38303869..38305589hg38UCSC Ensembl
chr17:36459835..36461554hg19UCSC Ensembl
Cytoband17q12
Allele length
AssemblyAllele length
hg381721
hg191720
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4267042
Supporting Variants
Samples
Known GenesMRPL45
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15833156
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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