A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15830436



Internal ID19902522
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:20400309..20422257hg38UCSC Ensembl
chr16:20411631..20433579hg19UCSC Ensembl
Cytoband16p12.3
Allele length
AssemblyAllele length
hg3821949
hg1921949
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4248305
Supporting Variants
Samples
Known GenesACSM5, PDILT
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15830436
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000047


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