A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15829161



Internal ID19901247
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:20585678..20706978hg38UCSC Ensembl
chr16:20597000..20718300hg19UCSC Ensembl
Cytoband16p12.3
Allele length
AssemblyAllele length
hg38121301
hg19121301
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4234898
Supporting Variants
Samples
Known GenesACSM1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15829161
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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