A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15828507



Internal ID19900593
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:9562635..9568647hg38UCSC Ensembl
chr16:9656492..9662504hg19UCSC Ensembl
Cytoband16p13.2
Allele length
AssemblyAllele length
hg386013
hg196013
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4247694
Supporting Variants
Samples
Known GenesMIR7641-2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15828507
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000049


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