A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15826606



Internal ID19552006
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:63654095..63654868hg38UCSC Ensembl
chr15:63946294..63947067hg19UCSC Ensembl
Cytoband15q22.31
Allele length
AssemblyAllele length
hg38774
hg19774
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4248665
Supporting Variants
Samples
Known GenesHERC1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15826606
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000047


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