A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15826106



Internal ID19898192
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:59135343..59178362hg38UCSC Ensembl
chr15:59427542..59470561hg19UCSC Ensembl
Cytoband15q22.2
Allele length
AssemblyAllele length
hg3843020
hg1943020
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4246248
Supporting Variants
Samples
Known GenesMIR2116, MYO1E
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15826106
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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