A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15825795



Internal ID19551195
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:89908401..89909375hg38UCSC Ensembl
chr15:90451633..90452607hg19UCSC Ensembl
Cytoband15q26.1
Allele length
AssemblyAllele length
hg38975
hg19975
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4237277
Supporting Variants
Samples
Known GenesC15orf38, C15orf38-AP3S2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15825795
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.001521


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