A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15825551



Internal ID19897637
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:67287526..67290748hg38UCSC Ensembl
chr15:67579864..67583086hg19UCSC Ensembl
Cytoband15q23
Allele length
AssemblyAllele length
hg383223
hg193223
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4236000
Supporting Variants
Samples
Known GenesIQCH
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15825551
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.001706


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer