A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15824662



Internal ID19550062
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr14:103934987..103938949hg38UCSC Ensembl
chr14:104401324..104405286hg19UCSC Ensembl
Cytoband14q32.33
Allele length
AssemblyAllele length
hg383963
hg193963
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4220283
Supporting Variants
Samples
Known GenesTDRD9
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15824662
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000138


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