A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15824511



Internal ID19896597
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:25755585..25761321hg38UCSC Ensembl
chr15:26000732..26006468hg19UCSC Ensembl
Cytoband15q12
Allele length
AssemblyAllele length
hg385737
hg195737
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4251637
Supporting Variants
Samples
Known GenesATP10A
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15824511
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000277


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