A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15823543



Internal ID19895629
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:48340363..48341882hg38UCSC Ensembl
chr15:48632560..48634079hg19UCSC Ensembl
Cytoband15q21.1
Allele length
AssemblyAllele length
hg381520
hg191520
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4247936
Supporting Variants
Samples
Known GenesDUT
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15823543
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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