A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15822



Internal ID15832612
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:35725111..35733240hg38UCSC Ensembl
Outerchr6:35724244..35734134hg38UCSC Ensembl
Innerchr6:35692888..35701017hg19UCSC Ensembl
Outerchr6:35692021..35701911hg19UCSC Ensembl
Innerchr6:35800866..35808995hg18UCSC Ensembl
Outerchr6:35799999..35809889hg18UCSC Ensembl
Innerchr6:35800866..35808995hg17UCSC Ensembl
Outerchr6:35799999..35809889hg17UCSC Ensembl
Cytoband6p21.31
Allele length
AssemblyAllele length
hg389891
hg199891
hg189891
hg179891
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7890
Supporting Variants
SamplesNA18502
Known GenesFKBP5, LOC285847
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15822
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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