A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15820880



Internal ID19892966
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr14:59222120..59224754hg38UCSC Ensembl
chr14:59688838..59691472hg19UCSC Ensembl
Cytoband14q23.1
Allele length
AssemblyAllele length
hg382635
hg192635
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4220013
Supporting Variants
Samples
Known GenesDAAM1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15820880
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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