A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15819047



Internal ID19544447
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:101728906..101733881hg38UCSC Ensembl
chr13:102381256..102386231hg19UCSC Ensembl
Cytoband13q33.1
Allele length
AssemblyAllele length
hg384976
hg194976
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4213977
Supporting Variants
Samples
Known GenesFGF14
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15819047
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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