A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15819044



Internal ID19891130
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:101527946..101673071hg38UCSC Ensembl
chr13:102180297..102325421hg19UCSC Ensembl
Cytoband13q33.1
Allele length
AssemblyAllele length
hg38145126
hg19145125
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4229302
Supporting Variants
Samples
Known GenesITGBL1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15819044
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000047


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer