A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15818037



Internal ID19890123
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:113526429..113532014hg38UCSC Ensembl
chr13:114180744..114186329hg19UCSC Ensembl
Cytoband13q34
Allele length
AssemblyAllele length
hg385586
hg195586
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4219333
Supporting Variants
Samples
Known GenesTMCO3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15818037
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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