A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15814708



Internal ID19540108
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:120520753..120524513hg38UCSC Ensembl
chr12:120958556..120962316hg19UCSC Ensembl
Cytoband12q24.31
Allele length
AssemblyAllele length
hg383761
hg193761
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4222072
Supporting Variants
Samples
Known GenesCOQ5
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15814708
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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