A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15813839



Internal ID19885925
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:32596636..32598931hg38UCSC Ensembl
chr13:33170773..33173068hg19UCSC Ensembl
Cytoband13q13.1
Allele length
AssemblyAllele length
hg382296
hg192296
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4529932
Supporting Variants
Samples
Known GenesPDS5B
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15813839
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.002397


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