A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15807144



Internal ID19879230
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:12075439..12100287hg38UCSC Ensembl
chr12:12228373..12253221hg19UCSC Ensembl
Cytoband12p13.2
Allele length
AssemblyAllele length
hg3824849
hg1924849
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4209587
Supporting Variants
Samples
Known GenesBCL2L14
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15807144
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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