A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15806916



Internal ID19879002
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:129037300..129038821hg38UCSC Ensembl
chr11:128907195..128908716hg19UCSC Ensembl
Cytoband11q24.3
Allele length
AssemblyAllele length
hg381522
hg191522
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4194182
Supporting Variants
Samples
Known GenesARHGAP32
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15806916
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.007283


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