A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15804764



Internal ID19876850
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:126395961..126397543hg38UCSC Ensembl
chr11:126265856..126267438hg19UCSC Ensembl
Cytoband11q24.2
Allele length
AssemblyAllele length
hg381583
hg191583
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4193303
Supporting Variants
Samples
Known GenesST3GAL4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15804764
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.006499


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer