A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15803446



Internal ID19875532
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:89382298..89415370hg38UCSC Ensembl
chr11:89115466..89148538hg19UCSC Ensembl
Cytoband11q14.3
Allele length
AssemblyAllele length
hg3833073
hg1933073
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4207989
Supporting Variants
Samples
Known GenesNOX4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15803446
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000047


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer