A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15802020



Internal ID19874106
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:66769810..66776070hg38UCSC Ensembl
chr11:66537281..66543541hg19UCSC Ensembl
Cytoband11q13.2
Allele length
AssemblyAllele length
hg386261
hg196261
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4199405
Supporting Variants
Samples
Known GenesC11orf80
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15802020
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000051


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