A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15798174



Internal ID19870260
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:5201647..5229058hg38UCSC Ensembl
chr11:5222877..5250288hg19UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg3827412
hg1927412
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4199979
Supporting Variants
Samples
Known GenesHBB
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15798174
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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