A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15797855



Internal ID19869941
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:125705634..125708244hg38UCSC Ensembl
chr10:127394203..127396813hg19UCSC Ensembl
Cytoband10q26.13
Allele length
AssemblyAllele length
hg382611
hg192611
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4197033
Supporting Variants
Samples
Known GenesFLJ37035, LOC283038
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15797855
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000092


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