A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15797242



Internal ID19869328
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:96483856..96492801hg38UCSC Ensembl
chr10:98243613..98252558hg19UCSC Ensembl
Cytoband10q24.1
Allele length
AssemblyAllele length
hg388946
hg198946
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4179824
Supporting Variants
Samples
Known GenesTLL2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15797242
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000046


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