A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15796019



Internal ID19521419
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:72901166..72911891hg38UCSC Ensembl
chr10:74660924..74671649hg19UCSC Ensembl
Cytoband10q22.1
Allele length
AssemblyAllele length
hg3810726
hg1910726
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4179540
Supporting Variants
Samples
Known GenesOIT3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15796019
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.000092


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