A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15795288



Internal ID19867374
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:57293453..57294030hg38UCSC Ensembl
chr10:59053213..59053790hg19UCSC Ensembl
Cytoband10q21.1
Allele length
AssemblyAllele length
hg38578
hg19578
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4175344
Supporting Variants
Samples
Known Genes
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15795288
Frequency
Sample Size10847
Observed Gain0
Observed Loss1
Observed Complex0
Frequency0.032045


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