A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15791828



Internal ID19517225
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrY:2973372..3568374hg38UCSC Ensembl
chrY:2841413..3436415hg19UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg38595003
hg19595003
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4312734
Supporting Variants
Samples
Known GenesLINC00278, ZFY
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Commentscomplex variant
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15791828
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.000184


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