A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15791722



Internal ID19863803
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:17510995..17518963hg38UCSC Ensembl
chrX:17529118..17537086hg19UCSC Ensembl
CytobandXp22.13
Allele length
AssemblyAllele length
hg387969
hg197969
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4312883
Supporting Variants
Samples
Known GenesNHS
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Commentscomplex variant
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15791722
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.000046


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