A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15791618



Internal ID19863697
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:83360168..83360649hg38UCSC Ensembl
chr9:85975083..85975564hg19UCSC Ensembl
Cytoband9q21.32
Allele length
AssemblyAllele length
hg38482
hg19482
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4334124
Supporting Variants
Samples
Known GenesFRMD3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Commentscomplex variant
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15791618
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.000046


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