A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15791



Internal ID15485390
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:38499491..38684428hg38UCSC Ensembl
Outerchr9:38497762..38685720hg38UCSC Ensembl
Innerchr9:38499488..38684425hg19UCSC Ensembl
Outerchr9:38497759..38685717hg19UCSC Ensembl
Innerchr9:38489488..38674425hg18UCSC Ensembl
Outerchr9:38487759..38675717hg18UCSC Ensembl
Innerchr9:38489488..38674425hg17UCSC Ensembl
Outerchr9:38487759..38675717hg17UCSC Ensembl
Cytoband9p13.1
Allele length
AssemblyAllele length
hg38187959
hg19187959
hg18187959
hg17187959
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8445
Supporting Variants
SamplesNA12872
Known GenesANKRD18A, FAM201A, FAM95C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv15791
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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