A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15790971



Internal ID19863040
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:168391336..168392203hg38UCSC Ensembl
chr6:168792016..168792883hg19UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg38868
hg19868
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4559605
Supporting Variants
Samples
Known Genes
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Commentscomplex variant
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15790971
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.085258


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