A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15790834



Internal ID19862900
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:87640774..87644338hg38UCSC Ensembl
chr6:88350492..88354056hg19UCSC Ensembl
Cytoband6q15
Allele length
AssemblyAllele length
hg383565
hg193565
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4337817
Supporting Variants
Samples
Known GenesORC3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Commentscomplex variant
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nssv15790834
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.000046


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