A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv15788274



Internal ID19513625
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:65391310..65394930hg38UCSC Ensembl
chr15:65683648..65687268hg19UCSC Ensembl
Cytoband15q22.31
Allele length
AssemblyAllele length
hg383621
hg193621
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4338964
Supporting Variants
Samples
Known GenesIGDCC4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Commentscomplex variant
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nssv15788274
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequency0.000046


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